Download the Folding at Home Linux client, navigate to the directory where it is, and in the terminal then type "./[name]"
The client doesn't need to be installed, you can just run it like I mentioned above. As for installing other programs, that will depend on your distro. Most likely it will just be a matter of typing 'apt-get install [program]' or something similar into the terminal. Which distro are you using?
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